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Cluster: HRGMv2_0262_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0262_4 HRGMv2_0262_4_35 40762 42225 - GT2
NULL(UNKNOWN) HRGMv2_0262_4 HRGMv2_0262_4_36 42435 45485 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0262_4 HRGMv2_0262_4_37 45920 47125 + UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme HRGMv2_0262_4 HRGMv2_0262_4_38 47127 47888 + GT26
pfam HRGMv2_0262_4 HRGMv2_0262_4_39 47983 49146 + Epimerase_2 | Glyco_trans_4_4
pfam HRGMv2_0262_4 HRGMv2_0262_4_40 49293 50141 + SpoU_methylase
TC HRGMv2_0262_4 HRGMv2_0262_4_41 50138 51139 + 3.A.1.13.2
TC HRGMv2_0262_4 HRGMv2_0262_4_42 51123 52004 + 3.A.1.13.2
TC HRGMv2_0262_4 HRGMv2_0262_4_43 52350 53528 + 2.A.6.2.47
TC HRGMv2_0262_4 HRGMv2_0262_4_44 53663 56845 + 2.A.6.2.22
TC HRGMv2_0262_4 HRGMv2_0262_4_45 56867 58252 + 2.A.6.2.39
Gene ID: HRGMv2_0262_4_35
Type: CAZyme
Location: 40762 - 42225 (-)
Gene ID: HRGMv2_0262_4_36
Type:
Location: 42435 - 45485 (-)
Gene ID: HRGMv2_0262_4_37
Type: pfam
Location: 45920 - 47125 (+)
Gene ID: HRGMv2_0262_4_38
Type: CAZyme
Location: 47127 - 47888 (+)
Gene ID: HRGMv2_0262_4_39
Type: pfam
Location: 47983 - 49146 (+)
Gene ID: HRGMv2_0262_4_40
Type: pfam
Location: 49293 - 50141 (+)
Gene ID: HRGMv2_0262_4_41
Type: TC
Location: 50138 - 51139 (+)
Gene ID: HRGMv2_0262_4_42
Type: TC
Location: 51123 - 52004 (+)
Gene ID: HRGMv2_0262_4_43
Type: TC
Location: 52350 - 53528 (+)
Gene ID: HRGMv2_0262_4_44
Type: TC
Location: 53663 - 56845 (+)
Gene ID: HRGMv2_0262_4_45
Type: TC
Location: 56867 - 58252 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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