Cluster: HRGMv2_0262_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0262
- CGC Family ID: CGCFAM_09292
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0262_39 | HRGMv2_0262_39_2 | 1156 | 2400 | - | 2.A.1.46.5 |
| TC | HRGMv2_0262_39 | HRGMv2_0262_39_3 | 3139 | 4476 | + | 2.A.62.1.3 |
| pfam | HRGMv2_0262_39 | HRGMv2_0262_39_4 | 4667 | 9253 | - | TamB |
| CAZyme | HRGMv2_0262_39 | HRGMv2_0262_39_5 | 9423 | 10466 | - | GT27 |
| pfam | HRGMv2_0262_39 | HRGMv2_0262_39_6 | 10463 | 11464 | - | Lip_A_acyltrans |
| pfam | HRGMv2_0262_39 | HRGMv2_0262_39_7 | 11431 | 12792 | - | UPF0004 | Radical_SAM |
| TC | HRGMv2_0262_39 | HRGMv2_0262_39_8 | 12860 | 14350 | - | 2.A.50.2.1 |
Gene ID: HRGMv2_0262_39_2
Type: TC
Location: 1156 - 2400 (-)
Type: TC
Location: 1156 - 2400 (-)
Gene ID: HRGMv2_0262_39_3
Type: TC
Location: 3139 - 4476 (+)
Type: TC
Location: 3139 - 4476 (+)
Gene ID: HRGMv2_0262_39_4
Type: pfam
Location: 4667 - 9253 (-)
Type: pfam
Location: 4667 - 9253 (-)
Gene ID: HRGMv2_0262_39_5
Type: CAZyme
Location: 9423 - 10466 (-)
Type: CAZyme
Location: 9423 - 10466 (-)
Gene ID: HRGMv2_0262_39_6
Type: pfam
Location: 10463 - 11464 (-)
Type: pfam
Location: 10463 - 11464 (-)
Gene ID: HRGMv2_0262_39_7
Type: pfam
Location: 11431 - 12792 (-)
Type: pfam
Location: 11431 - 12792 (-)
Gene ID: HRGMv2_0262_39_8
Type: TC
Location: 12860 - 14350 (-)
Type: TC
Location: 12860 - 14350 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Species
CAG-873 sp900540625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.