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Cluster: HRGMv2_0262_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0262_1 HRGMv2_0262_1_65 61664 62551 + GT2
NULL(UNKNOWN) HRGMv2_0262_1 HRGMv2_0262_1_66 62747 62920 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0262_1 HRGMv2_0262_1_67 63041 64978 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0262_1 HRGMv2_0262_1_68 65034 66833 - 1.I.1.1.3
STP HRGMv2_0262_1 HRGMv2_0262_1_69 66830 68323 - SpoIIE
STP HRGMv2_0262_1 HRGMv2_0262_1_70 68456 70006 - FHA
TC HRGMv2_0262_1 HRGMv2_0262_1_71 70099 71481 - 9.B.106.3.3
NULL(UNKNOWN) HRGMv2_0262_1 HRGMv2_0262_1_72 71501 71713 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0262_1 HRGMv2_0262_1_73 71965 72087 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0262_1 HRGMv2_0262_1_74 72250 72666 + 2.A.7.2.1
Gene ID: HRGMv2_0262_1_65
Type: CAZyme
Location: 61664 - 62551 (+)
Gene ID: HRGMv2_0262_1_66
Type:
Location: 62747 - 62920 (+)
Gene ID: HRGMv2_0262_1_67
Type:
Location: 63041 - 64978 (-)
Gene ID: HRGMv2_0262_1_68
Type: TC
Location: 65034 - 66833 (-)
Gene ID: HRGMv2_0262_1_69
Type: STP
Location: 66830 - 68323 (-)
Gene ID: HRGMv2_0262_1_70
Type: STP
Location: 68456 - 70006 (-)
Gene ID: HRGMv2_0262_1_71
Type: TC
Location: 70099 - 71481 (-)
Gene ID: HRGMv2_0262_1_72
Type:
Location: 71501 - 71713 (-)
Gene ID: HRGMv2_0262_1_73
Type:
Location: 71965 - 72087 (+)
Gene ID: HRGMv2_0262_1_74
Type: TC
Location: 72250 - 72666 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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