Cluster: HRGMv2_0260_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0260
- CGC Family ID: CGCFAM_03738
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0260_19 | HRGMv2_0260_19_1 | 1 | 777 | - | GT5 |
| pfam | HRGMv2_0260_19 | HRGMv2_0260_19_2 | 822 | 1469 | - | PCMT |
| NULL(UNKNOWN) | HRGMv2_0260_19 | HRGMv2_0260_19_3 | 1616 | 2527 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0260_19 | HRGMv2_0260_19_4 | 2546 | 3958 | + | 9.B.18.1.3 |
| TC | HRGMv2_0260_19 | HRGMv2_0260_19_5 | 4308 | 5174 | + | 9.A.25.1.1 |
| TC | HRGMv2_0260_19 | HRGMv2_0260_19_6 | 5357 | 5656 | + | 1.A.3.1.7 |
Gene ID: HRGMv2_0260_19_1
Type: CAZyme
Location: 1 - 777 (-)
Type: CAZyme
Location: 1 - 777 (-)
Gene ID: HRGMv2_0260_19_2
Type: pfam
Location: 822 - 1469 (-)
Type: pfam
Location: 822 - 1469 (-)
Gene ID: HRGMv2_0260_19_3
Type:
Location: 1616 - 2527 (+)
Type:
Location: 1616 - 2527 (+)
Gene ID: HRGMv2_0260_19_4
Type: TC
Location: 2546 - 3958 (+)
Type: TC
Location: 2546 - 3958 (+)
Gene ID: HRGMv2_0260_19_5
Type: TC
Location: 4308 - 5174 (+)
Type: TC
Location: 4308 - 5174 (+)
Gene ID: HRGMv2_0260_19_6
Type: TC
Location: 5357 - 5656 (+)
Type: TC
Location: 5357 - 5656 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
P3
Genus
Onthomorpha
Species
Onthomorpha sp900545215
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.