Cluster: HRGMv2_0260_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0260
- CGC Family ID: CGCFAM_05919
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0260_17 | HRGMv2_0260_17_34 | 32949 | 34145 | + | 8.A.1.2.2 |
| TC | HRGMv2_0260_17 | HRGMv2_0260_17_35 | 34186 | 34887 | + | 3.A.1.122.2 |
| TC | HRGMv2_0260_17 | HRGMv2_0260_17_36 | 34913 | 36136 | + | 3.A.1.122.12 |
| pfam | HRGMv2_0260_17 | HRGMv2_0260_17_37 | 36183 | 37232 | + | His_kinase |
| TF | HRGMv2_0260_17 | HRGMv2_0260_17_38 | 37229 | 37972 | + | LytTR |
| CAZyme | HRGMv2_0260_17 | HRGMv2_0260_17_39 | 37988 | 38731 | - | GH73 |
Gene ID: HRGMv2_0260_17_34
Type: TC
Location: 32949 - 34145 (+)
Type: TC
Location: 32949 - 34145 (+)
Gene ID: HRGMv2_0260_17_35
Type: TC
Location: 34186 - 34887 (+)
Type: TC
Location: 34186 - 34887 (+)
Gene ID: HRGMv2_0260_17_36
Type: TC
Location: 34913 - 36136 (+)
Type: TC
Location: 34913 - 36136 (+)
Gene ID: HRGMv2_0260_17_37
Type: pfam
Location: 36183 - 37232 (+)
Type: pfam
Location: 36183 - 37232 (+)
Gene ID: HRGMv2_0260_17_38
Type: TF
Location: 37229 - 37972 (+)
Type: TF
Location: 37229 - 37972 (+)
Gene ID: HRGMv2_0260_17_39
Type: CAZyme
Location: 37988 - 38731 (-)
Type: CAZyme
Location: 37988 - 38731 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
P3
Genus
Onthomorpha
Species
Onthomorpha sp900545215
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.