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Cluster: HRGMv2_0259_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0259_2 HRGMv2_0259_2_1 361 1356 - GH43_1
CAZyme HRGMv2_0259_2 HRGMv2_0259_2_2 1356 2480 - GH10
TC HRGMv2_0259_2 HRGMv2_0259_2_3 2519 3913 - 2.A.2.3.2
CAZyme HRGMv2_0259_2 HRGMv2_0259_2_4 3934 5904 - GH97
CAZyme HRGMv2_0259_2 HRGMv2_0259_2_5 5901 7358 - CE6
CAZyme HRGMv2_0259_2 HRGMv2_0259_2_6 7376 9439 - GH5_21
CAZyme HRGMv2_0259_2 HRGMv2_0259_2_7 9439 10812 - CBM6 | GH43_29
CAZyme HRGMv2_0259_2 HRGMv2_0259_2_8 10822 11994 - CE1
CAZyme HRGMv2_0259_2 HRGMv2_0259_2_9 12079 14193 - GH10
pfam HRGMv2_0259_2 HRGMv2_0259_2_10 14207 15280 - BT_3987-like_N | DUF5627
pfam HRGMv2_0259_2 HRGMv2_0259_2_11 15314 17071 - SusD_RagB | SusD-like_3
TC HRGMv2_0259_2 HRGMv2_0259_2_12 17092 19914 - 1.B.14.6.1
pfam HRGMv2_0259_2 HRGMv2_0259_2_13 19939 21858 - SusD_RagB | SusD-like_3
TC HRGMv2_0259_2 HRGMv2_0259_2_14 21873 25007 - 1.B.14.6.1
CAZyme HRGMv2_0259_2 HRGMv2_0259_2_15 25069 26787 - CBM91 | GH43_12
CAZyme HRGMv2_0259_2 HRGMv2_0259_2_16 27044 28708 - CBM91 | GH43_10
CAZyme HRGMv2_0259_2 HRGMv2_0259_2_17 28856 30469 - CE20 | CE20
TF HRGMv2_0259_2 HRGMv2_0259_2_18 30466 31341 - HTH_AraC | HTH_AraC
STP HRGMv2_0259_2 HRGMv2_0259_2_19 31352 34489 - HATPase_c | HisKA | Y_Y_Y
CAZyme HRGMv2_0259_2 HRGMv2_0259_2_20 34586 37384 + GH115
CAZyme HRGMv2_0259_2 HRGMv2_0259_2_21 37392 38720 + CBM6 | GH43_29
Gene ID: HRGMv2_0259_2_1
Type: CAZyme
Location: 361 - 1356 (-)
Gene ID: HRGMv2_0259_2_2
Type: CAZyme
Location: 1356 - 2480 (-)
Gene ID: HRGMv2_0259_2_3
Type: TC
Location: 2519 - 3913 (-)
Gene ID: HRGMv2_0259_2_4
Type: CAZyme
Location: 3934 - 5904 (-)
Gene ID: HRGMv2_0259_2_5
Type: CAZyme
Location: 5901 - 7358 (-)
Gene ID: HRGMv2_0259_2_6
Type: CAZyme
Location: 7376 - 9439 (-)
Gene ID: HRGMv2_0259_2_7
Type: CAZyme
Location: 9439 - 10812 (-)
Gene ID: HRGMv2_0259_2_8
Type: CAZyme
Location: 10822 - 11994 (-)
Gene ID: HRGMv2_0259_2_9
Type: CAZyme
Location: 12079 - 14193 (-)
Gene ID: HRGMv2_0259_2_10
Type: pfam
Location: 14207 - 15280 (-)
Gene ID: HRGMv2_0259_2_11
Type: pfam
Location: 15314 - 17071 (-)
Gene ID: HRGMv2_0259_2_12
Type: TC
Location: 17092 - 19914 (-)
Gene ID: HRGMv2_0259_2_13
Type: pfam
Location: 19939 - 21858 (-)
Gene ID: HRGMv2_0259_2_14
Type: TC
Location: 21873 - 25007 (-)
Gene ID: HRGMv2_0259_2_15
Type: CAZyme
Location: 25069 - 26787 (-)
Gene ID: HRGMv2_0259_2_16
Type: CAZyme
Location: 27044 - 28708 (-)
Gene ID: HRGMv2_0259_2_17
Type: CAZyme
Location: 28856 - 30469 (-)
Gene ID: HRGMv2_0259_2_18
Type: TF
Location: 30466 - 31341 (-)
Gene ID: HRGMv2_0259_2_19
Type: STP
Location: 31352 - 34489 (-)
Gene ID: HRGMv2_0259_2_20
Type: CAZyme
Location: 34586 - 37384 (+)
Gene ID: HRGMv2_0259_2_21
Type: CAZyme
Location: 37392 - 38720 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
CAG-873
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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