Cluster: HRGMv2_0259_CGC36
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0259
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0259_41 | HRGMv2_0259_41_2 | 1750 | 3318 | - | 9.A.25.1.1 |
| TC | HRGMv2_0259_41 | HRGMv2_0259_41_3 | 3340 | 4137 | - | 9.A.25.1.1 |
| TC | HRGMv2_0259_41 | HRGMv2_0259_41_4 | 4153 | 5616 | - | 9.A.25.1.1 |
| pfam | HRGMv2_0259_41 | HRGMv2_0259_41_5 | 5641 | 6657 | - | PorP_SprF |
| TC | HRGMv2_0259_41 | HRGMv2_0259_41_6 | 6660 | 7412 | - | 1.B.44.1.2 |
| NULL(UNKNOWN) | HRGMv2_0259_41 | HRGMv2_0259_41_7 | 7409 | 8806 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0259_41 | HRGMv2_0259_41_8 | 8916 | 9215 | - | Thioredoxin | Thioredoxin_2 | TraF |
| TC | HRGMv2_0259_41 | HRGMv2_0259_41_9 | 9272 | 10933 | - | 2.A.81.1.2 |
| peptidase | HRGMv2_0259_41 | HRGMv2_0259_41_10 | 11429 | 12733 | - | M38.UNW |
| CAZyme | HRGMv2_0259_41 | HRGMv2_0259_41_11 | 12730 | 13500 | - | GT2 |
| pfam | HRGMv2_0259_41 | HRGMv2_0259_41_12 | 13575 | 14474 | - | WYL |
| pfam | HRGMv2_0259_41 | HRGMv2_0259_41_13 | 14462 | 15931 | - | SSF |
| CAZyme | HRGMv2_0259_41 | HRGMv2_0259_41_14 | 15938 | 17131 | - | GH171 |
Gene ID: HRGMv2_0259_41_2
Type: TC
Location: 1750 - 3318 (-)
Type: TC
Location: 1750 - 3318 (-)
Gene ID: HRGMv2_0259_41_3
Type: TC
Location: 3340 - 4137 (-)
Type: TC
Location: 3340 - 4137 (-)
Gene ID: HRGMv2_0259_41_4
Type: TC
Location: 4153 - 5616 (-)
Type: TC
Location: 4153 - 5616 (-)
Gene ID: HRGMv2_0259_41_5
Type: pfam
Location: 5641 - 6657 (-)
Type: pfam
Location: 5641 - 6657 (-)
Gene ID: HRGMv2_0259_41_6
Type: TC
Location: 6660 - 7412 (-)
Type: TC
Location: 6660 - 7412 (-)
Gene ID: HRGMv2_0259_41_7
Type:
Location: 7409 - 8806 (-)
Type:
Location: 7409 - 8806 (-)
Gene ID: HRGMv2_0259_41_8
Type: pfam
Location: 8916 - 9215 (-)
Type: pfam
Location: 8916 - 9215 (-)
Gene ID: HRGMv2_0259_41_9
Type: TC
Location: 9272 - 10933 (-)
Type: TC
Location: 9272 - 10933 (-)
Gene ID: HRGMv2_0259_41_10
Type: peptidase
Location: 11429 - 12733 (-)
Type: peptidase
Location: 11429 - 12733 (-)
Gene ID: HRGMv2_0259_41_11
Type: CAZyme
Location: 12730 - 13500 (-)
Type: CAZyme
Location: 12730 - 13500 (-)
Gene ID: HRGMv2_0259_41_12
Type: pfam
Location: 13575 - 14474 (-)
Type: pfam
Location: 13575 - 14474 (-)
Gene ID: HRGMv2_0259_41_13
Type: pfam
Location: 14462 - 15931 (-)
Type: pfam
Location: 14462 - 15931 (-)
Gene ID: HRGMv2_0259_41_14
Type: CAZyme
Location: 15938 - 17131 (-)
Type: CAZyme
Location: 15938 - 17131 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.