Cluster: HRGMv2_0259_CGC30
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0259
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0259_23 | HRGMv2_0259_23_10 | 12238 | 14220 | + | GH13_14 |
| pfam | HRGMv2_0259_23 | HRGMv2_0259_23_11 | 14298 | 14921 | - | OMP_b-brl | OMP_b-brl_2 |
| pfam | HRGMv2_0259_23 | HRGMv2_0259_23_12 | 15132 | 16577 | + | Polysacc_synt | Polysacc_synt_3 |
| CAZyme | HRGMv2_0259_23 | HRGMv2_0259_23_13 | 16563 | 17498 | - | GT2 |
| pfam | HRGMv2_0259_23 | HRGMv2_0259_23_14 | 17507 | 18991 | - | GHL10 |
| pfam | HRGMv2_0259_23 | HRGMv2_0259_23_15 | 19430 | 20476 | + | DUF4421 |
| TC | HRGMv2_0259_23 | HRGMv2_0259_23_16 | 20477 | 21223 | - | 2.A.5.5.2 |
Gene ID: HRGMv2_0259_23_10
Type: CAZyme
Location: 12238 - 14220 (+)
Type: CAZyme
Location: 12238 - 14220 (+)
Gene ID: HRGMv2_0259_23_11
Type: pfam
Location: 14298 - 14921 (-)
Type: pfam
Location: 14298 - 14921 (-)
Gene ID: HRGMv2_0259_23_12
Type: pfam
Location: 15132 - 16577 (+)
Type: pfam
Location: 15132 - 16577 (+)
Gene ID: HRGMv2_0259_23_13
Type: CAZyme
Location: 16563 - 17498 (-)
Type: CAZyme
Location: 16563 - 17498 (-)
Gene ID: HRGMv2_0259_23_14
Type: pfam
Location: 17507 - 18991 (-)
Type: pfam
Location: 17507 - 18991 (-)
Gene ID: HRGMv2_0259_23_15
Type: pfam
Location: 19430 - 20476 (+)
Type: pfam
Location: 19430 - 20476 (+)
Gene ID: HRGMv2_0259_23_16
Type: TC
Location: 20477 - 21223 (-)
Type: TC
Location: 20477 - 21223 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.