Cluster: HRGMv2_0259_CGC29
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_0259
- CGC Family ID: CGCFAM_00002
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0259_22 | HRGMv2_0259_22_12 | 11511 | 12377 | + | GT2 |
| CAZyme | HRGMv2_0259_22 | HRGMv2_0259_22_13 | 12374 | 13453 | + | GT4 |
| CAZyme | HRGMv2_0259_22 | HRGMv2_0259_22_14 | 13453 | 14421 | + | GT2 |
| CAZyme | HRGMv2_0259_22 | HRGMv2_0259_22_15 | 14462 | 15619 | + | GT4 |
| pfam | HRGMv2_0259_22 | HRGMv2_0259_22_16 | 15741 | 16736 | + | Acyl_transf_3 |
| TC | HRGMv2_0259_22 | HRGMv2_0259_22_17 | 17244 | 17915 | + | 9.B.18.1.2 |
Gene ID: HRGMv2_0259_22_12
Type: CAZyme
Location: 11511 - 12377 (+)
Type: CAZyme
Location: 11511 - 12377 (+)
Gene ID: HRGMv2_0259_22_13
Type: CAZyme
Location: 12374 - 13453 (+)
Type: CAZyme
Location: 12374 - 13453 (+)
Gene ID: HRGMv2_0259_22_14
Type: CAZyme
Location: 13453 - 14421 (+)
Type: CAZyme
Location: 13453 - 14421 (+)
Gene ID: HRGMv2_0259_22_15
Type: CAZyme
Location: 14462 - 15619 (+)
Type: CAZyme
Location: 14462 - 15619 (+)
Gene ID: HRGMv2_0259_22_16
Type: pfam
Location: 15741 - 16736 (+)
Type: pfam
Location: 15741 - 16736 (+)
Gene ID: HRGMv2_0259_22_17
Type: TC
Location: 17244 - 17915 (+)
Type: TC
Location: 17244 - 17915 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.