Cluster: HRGMv2_0259_CGC21
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 7
- Substrate:
- Genome ID: HRGMv2_0259
- CGC Family ID: CGCFAM_00544
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0259_12 | HRGMv2_0259_12_34 | 36116 | 38866 | - | GH92 |
| CAZyme | HRGMv2_0259_12 | HRGMv2_0259_12_35 | 38874 | 40820 | - | CE20 | CE20 |
| CAZyme | HRGMv2_0259_12 | HRGMv2_0259_12_36 | 41027 | 43369 | + | GH95 |
| CAZyme | HRGMv2_0259_12 | HRGMv2_0259_12_37 | 43366 | 45936 | + | GH2 |
| TC | HRGMv2_0259_12 | HRGMv2_0259_12_38 | 46054 | 49167 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0259_12 | HRGMv2_0259_12_39 | 49186 | 50775 | + | SusD_RagB | SusD-like_3 |
| pfam | HRGMv2_0259_12 | HRGMv2_0259_12_40 | 51014 | 52741 | + | FG-GAP | FG-GAP_3 | FG-GAP_3 | FG-GAP_3 | FG-GAP_3 |
| CAZyme | HRGMv2_0259_12 | HRGMv2_0259_12_41 | 52883 | 55306 | + | GH36 |
| CAZyme | HRGMv2_0259_12 | HRGMv2_0259_12_42 | 55322 | 57502 | + | GH92 |
| TF | HRGMv2_0259_12 | HRGMv2_0259_12_43 | 57526 | 61530 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_0259_12 | HRGMv2_0259_12_44 | 61711 | 63852 | + | GH36 |
Gene ID: HRGMv2_0259_12_34
Type: CAZyme
Location: 36116 - 38866 (-)
Type: CAZyme
Location: 36116 - 38866 (-)
Gene ID: HRGMv2_0259_12_35
Type: CAZyme
Location: 38874 - 40820 (-)
Type: CAZyme
Location: 38874 - 40820 (-)
Gene ID: HRGMv2_0259_12_36
Type: CAZyme
Location: 41027 - 43369 (+)
Type: CAZyme
Location: 41027 - 43369 (+)
Gene ID: HRGMv2_0259_12_37
Type: CAZyme
Location: 43366 - 45936 (+)
Type: CAZyme
Location: 43366 - 45936 (+)
Gene ID: HRGMv2_0259_12_38
Type: TC
Location: 46054 - 49167 (+)
Type: TC
Location: 46054 - 49167 (+)
Gene ID: HRGMv2_0259_12_39
Type: pfam
Location: 49186 - 50775 (+)
Type: pfam
Location: 49186 - 50775 (+)
Gene ID: HRGMv2_0259_12_40
Type: pfam
Location: 51014 - 52741 (+)
Type: pfam
Location: 51014 - 52741 (+)
Gene ID: HRGMv2_0259_12_41
Type: CAZyme
Location: 52883 - 55306 (+)
Type: CAZyme
Location: 52883 - 55306 (+)
Gene ID: HRGMv2_0259_12_42
Type: CAZyme
Location: 55322 - 57502 (+)
Type: CAZyme
Location: 55322 - 57502 (+)
Gene ID: HRGMv2_0259_12_43
Type: TF
Location: 57526 - 61530 (+)
Type: TF
Location: 57526 - 61530 (+)
Gene ID: HRGMv2_0259_12_44
Type: CAZyme
Location: 61711 - 63852 (+)
Type: CAZyme
Location: 61711 - 63852 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.