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Cluster: HRGMv2_0259_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0259_11 HRGMv2_0259_11_11 14215 15834 + 9.B.174.1.1
TC HRGMv2_0259_11 HRGMv2_0259_11_12 15908 16822 + 2.A.4.1.6
pfam HRGMv2_0259_11 HRGMv2_0259_11_13 16893 18632 - SusD_RagB | SusD-like_3
TC HRGMv2_0259_11 HRGMv2_0259_11_14 18654 21458 - 1.B.14.6.1
pfam HRGMv2_0259_11 HRGMv2_0259_11_15 21534 23591 - SusD_RagB
TC HRGMv2_0259_11 HRGMv2_0259_11_16 23603 26782 - 1.B.14.6.1
CAZyme HRGMv2_0259_11 HRGMv2_0259_11_17 26969 28246 - GH28
pfam HRGMv2_0259_11 HRGMv2_0259_11_18 28246 29052 - Aldolase_II
TC HRGMv2_0259_11 HRGMv2_0259_11_19 29085 30116 - 2.A.7.6.1
Gene ID: HRGMv2_0259_11_11
Type: TC
Location: 14215 - 15834 (+)
Gene ID: HRGMv2_0259_11_12
Type: TC
Location: 15908 - 16822 (+)
Gene ID: HRGMv2_0259_11_13
Type: pfam
Location: 16893 - 18632 (-)
Gene ID: HRGMv2_0259_11_14
Type: TC
Location: 18654 - 21458 (-)
Gene ID: HRGMv2_0259_11_15
Type: pfam
Location: 21534 - 23591 (-)
Gene ID: HRGMv2_0259_11_16
Type: TC
Location: 23603 - 26782 (-)
Gene ID: HRGMv2_0259_11_17
Type: CAZyme
Location: 26969 - 28246 (-)
Gene ID: HRGMv2_0259_11_18
Type: pfam
Location: 28246 - 29052 (-)
Gene ID: HRGMv2_0259_11_19
Type: TC
Location: 29085 - 30116 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
CAG-873
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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