Cluster: HRGMv2_0259_CGC16
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_0259
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0259_9 | HRGMv2_0259_9_32 | 35088 | 36107 | + | GT2 |
| TC | HRGMv2_0259_9 | HRGMv2_0259_9_33 | 36219 | 37652 | + | 2.A.35.1.3 |
| NULL(UNKNOWN) | HRGMv2_0259_9 | HRGMv2_0259_9_34 | 37811 | 38998 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0259_9 | HRGMv2_0259_9_35 | 39128 | 40741 | + | 1.B.9.4.2 |
| CAZyme | HRGMv2_0259_9 | HRGMv2_0259_9_36 | 40906 | 43416 | + | GH115 |
| STP | HRGMv2_0259_9 | HRGMv2_0259_9_37 | 43476 | 44828 | - | HATPase_c | HisKA |
| pfam | HRGMv2_0259_9 | HRGMv2_0259_9_38 | 45018 | 47021 | - | BRCT | DNA_ligase_aden | DNA_ligase_ZBD | DNA_ligase_OB | HHH_2 | HHH_5 | HHH_5 | Nlig-Ia |
| CAZyme | HRGMv2_0259_9 | HRGMv2_0259_9_39 | 47185 | 49959 | + | GH13 |
| pfam | HRGMv2_0259_9 | HRGMv2_0259_9_40 | 50164 | 51189 | + | Hexapep | Hexapep | Hexapep | Hexapep | LpxD | Hexapep_2 | Hexapep_2 | Hexapep_2 | Hexapep_2 |
| CAZyme | HRGMv2_0259_9 | HRGMv2_0259_9_41 | 51203 | 52585 | + | CE11 |
Gene ID: HRGMv2_0259_9_32
Type: CAZyme
Location: 35088 - 36107 (+)
Type: CAZyme
Location: 35088 - 36107 (+)
Gene ID: HRGMv2_0259_9_33
Type: TC
Location: 36219 - 37652 (+)
Type: TC
Location: 36219 - 37652 (+)
Gene ID: HRGMv2_0259_9_34
Type:
Location: 37811 - 38998 (+)
Type:
Location: 37811 - 38998 (+)
Gene ID: HRGMv2_0259_9_35
Type: TC
Location: 39128 - 40741 (+)
Type: TC
Location: 39128 - 40741 (+)
Gene ID: HRGMv2_0259_9_36
Type: CAZyme
Location: 40906 - 43416 (+)
Type: CAZyme
Location: 40906 - 43416 (+)
Gene ID: HRGMv2_0259_9_37
Type: STP
Location: 43476 - 44828 (-)
Type: STP
Location: 43476 - 44828 (-)
Gene ID: HRGMv2_0259_9_38
Type: pfam
Location: 45018 - 47021 (-)
Type: pfam
Location: 45018 - 47021 (-)
Gene ID: HRGMv2_0259_9_39
Type: CAZyme
Location: 47185 - 49959 (+)
Type: CAZyme
Location: 47185 - 49959 (+)
Gene ID: HRGMv2_0259_9_40
Type: pfam
Location: 50164 - 51189 (+)
Type: pfam
Location: 50164 - 51189 (+)
Gene ID: HRGMv2_0259_9_41
Type: CAZyme
Location: 51203 - 52585 (+)
Type: CAZyme
Location: 51203 - 52585 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.