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Cluster: HRGMv2_0259_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0259_1 HRGMv2_0259_1_37 35697 36674 + GH43_17
STP HRGMv2_0259_1 HRGMv2_0259_1_38 36705 37262 - Sigma70_r2 | Sigma70_r4_2
TC HRGMv2_0259_1 HRGMv2_0259_1_39 37431 39614 + 1.B.14.8.2
NULL(UNKNOWN) HRGMv2_0259_1 HRGMv2_0259_1_40 39633 40544 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0259_1 HRGMv2_0259_1_41 40600 41706 - 3.A.1.105.4
TC HRGMv2_0259_1 HRGMv2_0259_1_42 41703 42746 - 3.A.1.105.4
TC HRGMv2_0259_1 HRGMv2_0259_1_43 42748 43494 - 3.A.1.105.15
TC HRGMv2_0259_1 HRGMv2_0259_1_44 43487 44401 - 3.A.1.105.15
TC HRGMv2_0259_1 HRGMv2_0259_1_45 44398 45285 - 3.A.1.105.15
Gene ID: HRGMv2_0259_1_37
Type: CAZyme
Location: 35697 - 36674 (+)
Gene ID: HRGMv2_0259_1_38
Type: STP
Location: 36705 - 37262 (-)
Gene ID: HRGMv2_0259_1_39
Type: TC
Location: 37431 - 39614 (+)
Gene ID: HRGMv2_0259_1_40
Type:
Location: 39633 - 40544 (+)
Gene ID: HRGMv2_0259_1_41
Type: TC
Location: 40600 - 41706 (-)
Gene ID: HRGMv2_0259_1_42
Type: TC
Location: 41703 - 42746 (-)
Gene ID: HRGMv2_0259_1_43
Type: TC
Location: 42748 - 43494 (-)
Gene ID: HRGMv2_0259_1_44
Type: TC
Location: 43487 - 44401 (-)
Gene ID: HRGMv2_0259_1_45
Type: TC
Location: 44398 - 45285 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
CAG-873
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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