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Cluster: HRGMv2_0257_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0257_1 HRGMv2_0257_1_79 95817 97196 - 2.A.22.5.3
CAZyme HRGMv2_0257_1 HRGMv2_0257_1_80 97508 99712 - GH92
CAZyme HRGMv2_0257_1 HRGMv2_0257_1_81 99741 101507 - GH110
NULL(UNKNOWN) HRGMv2_0257_1 HRGMv2_0257_1_82 101494 103476 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0257_1 HRGMv2_0257_1_83 103565 105703 - GH36
CAZyme HRGMv2_0257_1 HRGMv2_0257_1_84 105722 107647 - CE20 | CE20
TF HRGMv2_0257_1 HRGMv2_0257_1_85 107774 111793 - HTH_AraC
CAZyme HRGMv2_0257_1 HRGMv2_0257_1_86 111848 114313 - GH36
CAZyme HRGMv2_0257_1 HRGMv2_0257_1_87 114381 116408 - GH36
Gene ID: HRGMv2_0257_1_79
Type: TC
Location: 95817 - 97196 (-)
Gene ID: HRGMv2_0257_1_80
Type: CAZyme
Location: 97508 - 99712 (-)
Gene ID: HRGMv2_0257_1_81
Type: CAZyme
Location: 99741 - 101507 (-)
Gene ID: HRGMv2_0257_1_82
Type:
Location: 101494 - 103476 (-)
Gene ID: HRGMv2_0257_1_83
Type: CAZyme
Location: 103565 - 105703 (-)
Gene ID: HRGMv2_0257_1_84
Type: CAZyme
Location: 105722 - 107647 (-)
Gene ID: HRGMv2_0257_1_85
Type: TF
Location: 107774 - 111793 (-)
Gene ID: HRGMv2_0257_1_86
Type: CAZyme
Location: 111848 - 114313 (-)
Gene ID: HRGMv2_0257_1_87
Type: CAZyme
Location: 114381 - 116408 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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