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Cluster: HRGMv2_0257_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0257_5 HRGMv2_0257_5_42 35340 36308 - GT2
pfam HRGMv2_0257_5 HRGMv2_0257_5_43 36330 36881 - DUF4199
STP HRGMv2_0257_5 HRGMv2_0257_5_44 37018 37851 - TPR_1
TC HRGMv2_0257_5 HRGMv2_0257_5_45 37859 39157 - 2.A.66.1.36
NULL(UNKNOWN) HRGMv2_0257_5 HRGMv2_0257_5_46 39695 40135 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0257_5 HRGMv2_0257_5_47 40164 42140 - GH51_2
Gene ID: HRGMv2_0257_5_42
Type: CAZyme
Location: 35340 - 36308 (-)
Gene ID: HRGMv2_0257_5_43
Type: pfam
Location: 36330 - 36881 (-)
Gene ID: HRGMv2_0257_5_44
Type: STP
Location: 37018 - 37851 (-)
Gene ID: HRGMv2_0257_5_45
Type: TC
Location: 37859 - 39157 (-)
Gene ID: HRGMv2_0257_5_46
Type:
Location: 39695 - 40135 (-)
Gene ID: HRGMv2_0257_5_47
Type: CAZyme
Location: 40164 - 42140 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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