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Cluster: HRGMv2_0257_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0257_4 HRGMv2_0257_4_124 141867 143489 + GH29
NULL(UNKNOWN) HRGMv2_0257_4 HRGMv2_0257_4_125 143387 143632 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0257_4 HRGMv2_0257_4_126 143684 145072 + NusB
TC HRGMv2_0257_4 HRGMv2_0257_4_127 145124 145456 + 3.A.5.1.1
NULL(UNKNOWN) HRGMv2_0257_4 HRGMv2_0257_4_128 145516 146490 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0257_4 HRGMv2_0257_4_129 146468 147148 + CoaE
CAZyme HRGMv2_0257_4 HRGMv2_0257_4_130 147170 148603 - GH13
Gene ID: HRGMv2_0257_4_124
Type: CAZyme
Location: 141867 - 143489 (+)
Gene ID: HRGMv2_0257_4_125
Type:
Location: 143387 - 143632 (-)
Gene ID: HRGMv2_0257_4_126
Type: pfam
Location: 143684 - 145072 (+)
Gene ID: HRGMv2_0257_4_127
Type: TC
Location: 145124 - 145456 (+)
Gene ID: HRGMv2_0257_4_128
Type:
Location: 145516 - 146490 (+)
Gene ID: HRGMv2_0257_4_129
Type: pfam
Location: 146468 - 147148 (+)
Gene ID: HRGMv2_0257_4_130
Type: CAZyme
Location: 147170 - 148603 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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