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Cluster: HRGMv2_0257_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0257_3 HRGMv2_0257_3_208 248304 251651 + GH29
TF HRGMv2_0257_3 HRGMv2_0257_3_209 251679 252629 + HTH_AraC | HTH_AraC
NULL(UNKNOWN) HRGMv2_0257_3 HRGMv2_0257_3_210 252626 252724 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0257_3 HRGMv2_0257_3_211 252788 254668 + 3.A.1.120.6
NULL(UNKNOWN) HRGMv2_0257_3 HRGMv2_0257_3_212 254910 255386 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0257_3 HRGMv2_0257_3_213 255694 258282 - 3.A.9.1.2
pfam HRGMv2_0257_3 HRGMv2_0257_3_214 258395 259990 - FAD-depend_C
TC HRGMv2_0257_3 HRGMv2_0257_3_215 260008 261423 - 2.A.66.1.32
Gene ID: HRGMv2_0257_3_208
Type: CAZyme
Location: 248304 - 251651 (+)
Gene ID: HRGMv2_0257_3_209
Type: TF
Location: 251679 - 252629 (+)
Gene ID: HRGMv2_0257_3_210
Type:
Location: 252626 - 252724 (+)
Gene ID: HRGMv2_0257_3_211
Type: TC
Location: 252788 - 254668 (+)
Gene ID: HRGMv2_0257_3_212
Type:
Location: 254910 - 255386 (-)
Gene ID: HRGMv2_0257_3_213
Type: TC
Location: 255694 - 258282 (-)
Gene ID: HRGMv2_0257_3_214
Type: pfam
Location: 258395 - 259990 (-)
Gene ID: HRGMv2_0257_3_215
Type: TC
Location: 260008 - 261423 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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