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Cluster: HRGMv2_0257_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0257_3 HRGMv2_0257_3_188 219317 221839 - GH2
CAZyme HRGMv2_0257_3 HRGMv2_0257_3_189 221895 223061 - GH53
CAZyme HRGMv2_0257_3 HRGMv2_0257_3_190 223252 225864 - GH147
pfam HRGMv2_0257_3 HRGMv2_0257_3_191 225991 227109 + META | META
TC HRGMv2_0257_3 HRGMv2_0257_3_192 227216 228400 - 3.A.5.8.1
pfam HRGMv2_0257_3 HRGMv2_0257_3_193 228432 229034 - GrpE
pfam HRGMv2_0257_3 HRGMv2_0257_3_194 229247 230404 - OEP | OEP
TC HRGMv2_0257_3 HRGMv2_0257_3_195 230434 233544 - 2.A.6.1.7
TC HRGMv2_0257_3 HRGMv2_0257_3_196 233612 234775 - 2.A.6.1.15
Gene ID: HRGMv2_0257_3_188
Type: CAZyme
Location: 219317 - 221839 (-)
Gene ID: HRGMv2_0257_3_189
Type: CAZyme
Location: 221895 - 223061 (-)
Gene ID: HRGMv2_0257_3_190
Type: CAZyme
Location: 223252 - 225864 (-)
Gene ID: HRGMv2_0257_3_191
Type: pfam
Location: 225991 - 227109 (+)
Gene ID: HRGMv2_0257_3_192
Type: TC
Location: 227216 - 228400 (-)
Gene ID: HRGMv2_0257_3_193
Type: pfam
Location: 228432 - 229034 (-)
Gene ID: HRGMv2_0257_3_194
Type: pfam
Location: 229247 - 230404 (-)
Gene ID: HRGMv2_0257_3_195
Type: TC
Location: 230434 - 233544 (-)
Gene ID: HRGMv2_0257_3_196
Type: TC
Location: 233612 - 234775 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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