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Cluster: HRGMv2_0252_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0252_4 HRGMv2_0252_4_8 6266 8875 + 1.C.105.2.12
NULL(UNKNOWN) HRGMv2_0252_4 HRGMv2_0252_4_9 9008 10030 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0252_4 HRGMv2_0252_4_10 10067 11458 + 3.A.1.11.8
TC HRGMv2_0252_4 HRGMv2_0252_4_11 11475 12230 + 3.A.1.11.1
TC HRGMv2_0252_4 HRGMv2_0252_4_12 12227 13030 + 3.A.1.11.7
TC HRGMv2_0252_4 HRGMv2_0252_4_13 13027 14340 + 3.A.1.11.7
pfam HRGMv2_0252_4 HRGMv2_0252_4_14 14337 15080 + SpoU_methylase | MRM3-like_sub_bind
pfam HRGMv2_0252_4 HRGMv2_0252_4_15 15077 18004 + PPDK_N
CAZyme HRGMv2_0252_4 HRGMv2_0252_4_16 18030 19538 + GH13_38
Gene ID: HRGMv2_0252_4_8
Type: TC
Location: 6266 - 8875 (+)
Gene ID: HRGMv2_0252_4_9
Type:
Location: 9008 - 10030 (+)
Gene ID: HRGMv2_0252_4_10
Type: TC
Location: 10067 - 11458 (+)
Gene ID: HRGMv2_0252_4_11
Type: TC
Location: 11475 - 12230 (+)
Gene ID: HRGMv2_0252_4_12
Type: TC
Location: 12227 - 13030 (+)
Gene ID: HRGMv2_0252_4_13
Type: TC
Location: 13027 - 14340 (+)
Gene ID: HRGMv2_0252_4_14
Type: pfam
Location: 14337 - 15080 (+)
Gene ID: HRGMv2_0252_4_15
Type: pfam
Location: 15077 - 18004 (+)
Gene ID: HRGMv2_0252_4_16
Type: CAZyme
Location: 18030 - 19538 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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