dbCAN Logo

Cluster: HRGMv2_0252_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0252_2 HRGMv2_0252_2_98 142896 146153 + 1.B.14.6.1
pfam HRGMv2_0252_2 HRGMv2_0252_2_99 146164 147789 + SusD_RagB | SusD-like_3
CAZyme HRGMv2_0252_2 HRGMv2_0252_2_100 147792 149816 + GH127
CAZyme HRGMv2_0252_2 HRGMv2_0252_2_101 149829 151667 + GH127
pfam HRGMv2_0252_2 HRGMv2_0252_2_102 151891 153222 + NHL | NHL | TIG
TC HRGMv2_0252_2 HRGMv2_0252_2_103 153234 156326 + 1.B.14.6.1
pfam HRGMv2_0252_2 HRGMv2_0252_2_104 156340 158340 + SusD_RagB | SusD-like_3
pfam HRGMv2_0252_2 HRGMv2_0252_2_105 158360 159334 + BT_3987-like_N | BT_3044-like_C | DUF4973
CAZyme HRGMv2_0252_2 HRGMv2_0252_2_106 159344 160411 + CBM6
Gene ID: HRGMv2_0252_2_98
Type: TC
Location: 142896 - 146153 (+)
Gene ID: HRGMv2_0252_2_99
Type: pfam
Location: 146164 - 147789 (+)
Gene ID: HRGMv2_0252_2_100
Type: CAZyme
Location: 147792 - 149816 (+)
Gene ID: HRGMv2_0252_2_101
Type: CAZyme
Location: 149829 - 151667 (+)
Gene ID: HRGMv2_0252_2_102
Type: pfam
Location: 151891 - 153222 (+)
Gene ID: HRGMv2_0252_2_103
Type: TC
Location: 153234 - 156326 (+)
Gene ID: HRGMv2_0252_2_104
Type: pfam
Location: 156340 - 158340 (+)
Gene ID: HRGMv2_0252_2_105
Type: pfam
Location: 158360 - 159334 (+)
Gene ID: HRGMv2_0252_2_106
Type: CAZyme
Location: 159344 - 160411 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List