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Cluster: HRGMv2_0252_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0252_42 HRGMv2_0252_42_6 7086 8135 + 2.A.119.3.2
STP HRGMv2_0252_42 HRGMv2_0252_42_7 8201 8374 + Fer4 | Fer4
CAZyme HRGMv2_0252_42 HRGMv2_0252_42_8 8427 10406 - GH13_46
TC HRGMv2_0252_42 HRGMv2_0252_42_9 10436 11815 - 2.A.2.6.3
TC HRGMv2_0252_42 HRGMv2_0252_42_10 11968 13428 + 8.A.59.2.1
TF HRGMv2_0252_42 HRGMv2_0252_42_11 13433 14188 + LytTR
CAZyme HRGMv2_0252_42 HRGMv2_0252_42_12 14200 15447 + GH13
pfam HRGMv2_0252_42 HRGMv2_0252_42_13 15532 16761 + DNA_methylase | Vsr | DUF559
CAZyme HRGMv2_0252_42 HRGMv2_0252_42_14 16831 17976 + GH73
Gene ID: HRGMv2_0252_42_6
Type: TC
Location: 7086 - 8135 (+)
Gene ID: HRGMv2_0252_42_7
Type: STP
Location: 8201 - 8374 (+)
Gene ID: HRGMv2_0252_42_8
Type: CAZyme
Location: 8427 - 10406 (-)
Gene ID: HRGMv2_0252_42_9
Type: TC
Location: 10436 - 11815 (-)
Gene ID: HRGMv2_0252_42_10
Type: TC
Location: 11968 - 13428 (+)
Gene ID: HRGMv2_0252_42_11
Type: TF
Location: 13433 - 14188 (+)
Gene ID: HRGMv2_0252_42_12
Type: CAZyme
Location: 14200 - 15447 (+)
Gene ID: HRGMv2_0252_42_13
Type: pfam
Location: 15532 - 16761 (+)
Gene ID: HRGMv2_0252_42_14
Type: CAZyme
Location: 16831 - 17976 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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