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Cluster: HRGMv2_0252_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0252_33 HRGMv2_0252_33_17 15124 16878 + 3.A.2.3.3
TC HRGMv2_0252_33 HRGMv2_0252_33_18 16868 18193 + 3.A.2.3.3
pfam HRGMv2_0252_33 HRGMv2_0252_33_19 18193 18807 + ATP-synt_D
TC HRGMv2_0252_33 HRGMv2_0252_33_20 18804 20630 + 3.A.2.3.3
pfam HRGMv2_0252_33 HRGMv2_0252_33_21 20657 21079 + ATP-synt_C | ATP-synt_C
pfam HRGMv2_0252_33 HRGMv2_0252_33_22 21095 22552 + PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
CAZyme HRGMv2_0252_33 HRGMv2_0252_33_23 22659 23723 + GH171
TC HRGMv2_0252_33 HRGMv2_0252_33_24 23754 25094 + 9.B.146.1.4
Gene ID: HRGMv2_0252_33_17
Type: TC
Location: 15124 - 16878 (+)
Gene ID: HRGMv2_0252_33_18
Type: TC
Location: 16868 - 18193 (+)
Gene ID: HRGMv2_0252_33_19
Type: pfam
Location: 18193 - 18807 (+)
Gene ID: HRGMv2_0252_33_20
Type: TC
Location: 18804 - 20630 (+)
Gene ID: HRGMv2_0252_33_21
Type: pfam
Location: 20657 - 21079 (+)
Gene ID: HRGMv2_0252_33_22
Type: pfam
Location: 21095 - 22552 (+)
Gene ID: HRGMv2_0252_33_23
Type: CAZyme
Location: 22659 - 23723 (+)
Gene ID: HRGMv2_0252_33_24
Type: TC
Location: 23754 - 25094 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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