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Cluster: HRGMv2_0252_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0252_30 HRGMv2_0252_30_16 19472 20311 + 1.B.42.1.2
pfam HRGMv2_0252_30 HRGMv2_0252_30_17 20333 21976 + Metallophos | MetallophosC | MetallophosN
TC HRGMv2_0252_30 HRGMv2_0252_30_18 22120 23565 + 2.A.1.4.6
pfam HRGMv2_0252_30 HRGMv2_0252_30_19 23577 24269 + Ribul_P_3_epim
pfam HRGMv2_0252_30 HRGMv2_0252_30_20 24295 25365 - Exo_endo_phos
TC HRGMv2_0252_30 HRGMv2_0252_30_21 25367 26023 - 9.B.104.1.2
STP HRGMv2_0252_30 HRGMv2_0252_30_22 26034 27857 - HATPase_c
NULL(UNKNOWN) HRGMv2_0252_30 HRGMv2_0252_30_23 27937 28260 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0252_30 HRGMv2_0252_30_24 28328 30595 + GH92
Gene ID: HRGMv2_0252_30_16
Type: TC
Location: 19472 - 20311 (+)
Gene ID: HRGMv2_0252_30_17
Type: pfam
Location: 20333 - 21976 (+)
Gene ID: HRGMv2_0252_30_18
Type: TC
Location: 22120 - 23565 (+)
Gene ID: HRGMv2_0252_30_19
Type: pfam
Location: 23577 - 24269 (+)
Gene ID: HRGMv2_0252_30_20
Type: pfam
Location: 24295 - 25365 (-)
Gene ID: HRGMv2_0252_30_21
Type: TC
Location: 25367 - 26023 (-)
Gene ID: HRGMv2_0252_30_22
Type: STP
Location: 26034 - 27857 (-)
Gene ID: HRGMv2_0252_30_23
Type:
Location: 27937 - 28260 (-)
Gene ID: HRGMv2_0252_30_24
Type: CAZyme
Location: 28328 - 30595 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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