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Cluster: HRGMv2_0252_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0252_1 HRGMv2_0252_1_83 101663 102451 + 2.A.5.5.2
pfam HRGMv2_0252_1 HRGMv2_0252_1_84 102505 103758 - OEP | OEP
TC HRGMv2_0252_1 HRGMv2_0252_1_85 103771 106896 - 2.A.6.1.10
pfam HRGMv2_0252_1 HRGMv2_0252_1_86 106901 108070 - HlyD_3 | HlyD_D23
pfam HRGMv2_0252_1 HRGMv2_0252_1_87 108171 108671 - DUF6769
TC HRGMv2_0252_1 HRGMv2_0252_1_88 108828 110762 + 3.A.16.1.2
NULL(UNKNOWN) HRGMv2_0252_1 HRGMv2_0252_1_89 110764 111237 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0252_1 HRGMv2_0252_1_90 111246 114590 - GH106
Gene ID: HRGMv2_0252_1_83
Type: TC
Location: 101663 - 102451 (+)
Gene ID: HRGMv2_0252_1_84
Type: pfam
Location: 102505 - 103758 (-)
Gene ID: HRGMv2_0252_1_85
Type: TC
Location: 103771 - 106896 (-)
Gene ID: HRGMv2_0252_1_86
Type: pfam
Location: 106901 - 108070 (-)
Gene ID: HRGMv2_0252_1_87
Type: pfam
Location: 108171 - 108671 (-)
Gene ID: HRGMv2_0252_1_88
Type: TC
Location: 108828 - 110762 (+)
Gene ID: HRGMv2_0252_1_89
Type:
Location: 110764 - 111237 (+)
Gene ID: HRGMv2_0252_1_90
Type: CAZyme
Location: 111246 - 114590 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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