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Cluster: HRGMv2_0252_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0252_11 HRGMv2_0252_11_50 56438 57106 - 3.A.1.125.1
CAZyme HRGMv2_0252_11 HRGMv2_0252_11_51 58343 59653 - GH171
TC HRGMv2_0252_11 HRGMv2_0252_11_52 59650 60645 - 3.A.2.1.5
TC HRGMv2_0252_11 HRGMv2_0252_11_53 60706 62301 - 3.A.2.1.2
TC HRGMv2_0252_11 HRGMv2_0252_11_54 62308 62871 - 3.A.2.1.2
pfam HRGMv2_0252_11 HRGMv2_0252_11_55 62873 63388 - ATP-synt_B
pfam HRGMv2_0252_11 HRGMv2_0252_11_56 63395 63637 - ATP-synt_C
TC HRGMv2_0252_11 HRGMv2_0252_11_57 63649 64728 - 3.A.2.1.7
pfam HRGMv2_0252_11 HRGMv2_0252_11_58 64725 64976 - ATP-synt_DE_N
TC HRGMv2_0252_11 HRGMv2_0252_11_59 64982 66502 - 3.A.2.1.2
Gene ID: HRGMv2_0252_11_50
Type: TC
Location: 56438 - 57106 (-)
Gene ID: HRGMv2_0252_11_51
Type: CAZyme
Location: 58343 - 59653 (-)
Gene ID: HRGMv2_0252_11_52
Type: TC
Location: 59650 - 60645 (-)
Gene ID: HRGMv2_0252_11_53
Type: TC
Location: 60706 - 62301 (-)
Gene ID: HRGMv2_0252_11_54
Type: TC
Location: 62308 - 62871 (-)
Gene ID: HRGMv2_0252_11_55
Type: pfam
Location: 62873 - 63388 (-)
Gene ID: HRGMv2_0252_11_56
Type: pfam
Location: 63395 - 63637 (-)
Gene ID: HRGMv2_0252_11_57
Type: TC
Location: 63649 - 64728 (-)
Gene ID: HRGMv2_0252_11_58
Type: pfam
Location: 64725 - 64976 (-)
Gene ID: HRGMv2_0252_11_59
Type: TC
Location: 64982 - 66502 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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