dbCAN Logo

Cluster: HRGMv2_0252_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0252_10 HRGMv2_0252_10_21 29626 30975 + 2.A.66.1.33
pfam HRGMv2_0252_10 HRGMv2_0252_10_22 31050 31745 - Hydrolase | HAD | Hydrolase_like | HAD_2
pfam HRGMv2_0252_10 HRGMv2_0252_10_23 31748 32062 - DUF4491
CAZyme HRGMv2_0252_10 HRGMv2_0252_10_24 32119 34248 - GH3
TC HRGMv2_0252_10 HRGMv2_0252_10_25 34261 35550 - 2.A.35.1.5
pfam HRGMv2_0252_10 HRGMv2_0252_10_26 35627 36865 + UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
NULL(UNKNOWN) HRGMv2_0252_10 HRGMv2_0252_10_27 36877 37173 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0252_10 HRGMv2_0252_10_28 37400 38890 + 1.A.13.2.3
Gene ID: HRGMv2_0252_10_21
Type: TC
Location: 29626 - 30975 (+)
Gene ID: HRGMv2_0252_10_22
Type: pfam
Location: 31050 - 31745 (-)
Gene ID: HRGMv2_0252_10_23
Type: pfam
Location: 31748 - 32062 (-)
Gene ID: HRGMv2_0252_10_24
Type: CAZyme
Location: 32119 - 34248 (-)
Gene ID: HRGMv2_0252_10_25
Type: TC
Location: 34261 - 35550 (-)
Gene ID: HRGMv2_0252_10_26
Type: pfam
Location: 35627 - 36865 (+)
Gene ID: HRGMv2_0252_10_27
Type:
Location: 36877 - 37173 (-)
Gene ID: HRGMv2_0252_10_28
Type: TC
Location: 37400 - 38890 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List