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Cluster: HRGMv2_0252_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0252_7 HRGMv2_0252_7_19 25549 26748 - GH99
pfam HRGMv2_0252_7 HRGMv2_0252_7_20 26738 28390 - Laminin_G_3
CAZyme HRGMv2_0252_7 HRGMv2_0252_7_21 28423 29256 - GH16_3
pfam HRGMv2_0252_7 HRGMv2_0252_7_22 29287 31299 - SusD_RagB | SusD-like_3
TC HRGMv2_0252_7 HRGMv2_0252_7_23 31312 34527 - 1.B.14.6.1
NULL(UNKNOWN) HRGMv2_0252_7 HRGMv2_0252_7_24 34540 35178 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0252_7 HRGMv2_0252_7_25 35262 36485 - DUF4861
CAZyme HRGMv2_0252_7 HRGMv2_0252_7_26 36494 38233 - GH105
Gene ID: HRGMv2_0252_7_19
Type: CAZyme
Location: 25549 - 26748 (-)
Gene ID: HRGMv2_0252_7_20
Type: pfam
Location: 26738 - 28390 (-)
Gene ID: HRGMv2_0252_7_21
Type: CAZyme
Location: 28423 - 29256 (-)
Gene ID: HRGMv2_0252_7_22
Type: pfam
Location: 29287 - 31299 (-)
Gene ID: HRGMv2_0252_7_23
Type: TC
Location: 31312 - 34527 (-)
Gene ID: HRGMv2_0252_7_24
Type:
Location: 34540 - 35178 (-)
Gene ID: HRGMv2_0252_7_25
Type: pfam
Location: 35262 - 36485 (-)
Gene ID: HRGMv2_0252_7_26
Type: CAZyme
Location: 36494 - 38233 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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