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Cluster: HRGMv2_0252_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0252_6 HRGMv2_0252_6_1 135 1589 - GT2
pfam HRGMv2_0252_6 HRGMv2_0252_6_2 1646 3199 - DUF6377
pfam HRGMv2_0252_6 HRGMv2_0252_6_3 3307 5325 - DUF5016 | DUF5125 | DUF5121 | DUF5121
CAZyme HRGMv2_0252_6 HRGMv2_0252_6_4 5340 6830 - GH30_3
pfam HRGMv2_0252_6 HRGMv2_0252_6_5 6835 8358 - SusD_RagB | SusD-like_3
TC HRGMv2_0252_6 HRGMv2_0252_6_6 8374 11352 - 1.B.14.6.1
peptidase HRGMv2_0252_6 HRGMv2_0252_6_7 11851 15120 + S41.UPB
CAZyme HRGMv2_0252_6 HRGMv2_0252_6_8 15131 15853 + GT2
peptidase HRGMv2_0252_6 HRGMv2_0252_6_9 15854 17245 + M38.UNW
pfam HRGMv2_0252_6 HRGMv2_0252_6_10 17250 19373 - S1 | Tex_N | HHH_3 | HHH_7 | Tex_YqgF | HHH_9 | Tex_central_region
TC HRGMv2_0252_6 HRGMv2_0252_6_11 19424 21220 - 2.A.49.6.1
Gene ID: HRGMv2_0252_6_1
Type: CAZyme
Location: 135 - 1589 (-)
Gene ID: HRGMv2_0252_6_2
Type: pfam
Location: 1646 - 3199 (-)
Gene ID: HRGMv2_0252_6_3
Type: pfam
Location: 3307 - 5325 (-)
Gene ID: HRGMv2_0252_6_4
Type: CAZyme
Location: 5340 - 6830 (-)
Gene ID: HRGMv2_0252_6_5
Type: pfam
Location: 6835 - 8358 (-)
Gene ID: HRGMv2_0252_6_6
Type: TC
Location: 8374 - 11352 (-)
Gene ID: HRGMv2_0252_6_7
Type: peptidase
Location: 11851 - 15120 (+)
Gene ID: HRGMv2_0252_6_8
Type: CAZyme
Location: 15131 - 15853 (+)
Gene ID: HRGMv2_0252_6_9
Type: peptidase
Location: 15854 - 17245 (+)
Gene ID: HRGMv2_0252_6_10
Type: pfam
Location: 17250 - 19373 (-)
Gene ID: HRGMv2_0252_6_11
Type: TC
Location: 19424 - 21220 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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