Cluster: HRGMv2_0242_CGC35
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0242
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0242_50 | HRGMv2_0242_50_88 | 119820 | 121427 | + | GH63 |
| TC | HRGMv2_0242_50 | HRGMv2_0242_50_89 | 121466 | 122353 | + | 1.C.12.3.2 |
| TC | HRGMv2_0242_50 | HRGMv2_0242_50_90 | 122437 | 123654 | - | 2.A.1.7.10 |
| pfam | HRGMv2_0242_50 | HRGMv2_0242_50_91 | 123821 | 124393 | - | ADK | AAA_17 | AAA_18 | AAA_33 |
| STP | HRGMv2_0242_50 | HRGMv2_0242_50_92 | 124447 | 124986 | - | Pribosyltran |
| CAZyme | HRGMv2_0242_50 | HRGMv2_0242_50_93 | 125084 | 125869 | - | GH16_3 |
Gene ID: HRGMv2_0242_50_88
Type: CAZyme
Location: 119820 - 121427 (+)
Type: CAZyme
Location: 119820 - 121427 (+)
Gene ID: HRGMv2_0242_50_89
Type: TC
Location: 121466 - 122353 (+)
Type: TC
Location: 121466 - 122353 (+)
Gene ID: HRGMv2_0242_50_90
Type: TC
Location: 122437 - 123654 (-)
Type: TC
Location: 122437 - 123654 (-)
Gene ID: HRGMv2_0242_50_91
Type: pfam
Location: 123821 - 124393 (-)
Type: pfam
Location: 123821 - 124393 (-)
Gene ID: HRGMv2_0242_50_92
Type: STP
Location: 124447 - 124986 (-)
Type: STP
Location: 124447 - 124986 (-)
Gene ID: HRGMv2_0242_50_93
Type: CAZyme
Location: 125084 - 125869 (-)
Type: CAZyme
Location: 125084 - 125869 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp002265625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0242_50_88 | vegetarian > omnivore | 2.23071 | 0.02472 |