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Cluster: HRGMv2_0242_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0242_49 HRGMv2_0242_49_31 50177 51340 + GT4
CAZyme HRGMv2_0242_49 HRGMv2_0242_49_32 51557 52393 + GT2
CAZyme HRGMv2_0242_49 HRGMv2_0242_49_33 52420 53460 + GT4
pfam HRGMv2_0242_49 HRGMv2_0242_49_34 53551 54816 + UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme HRGMv2_0242_49 HRGMv2_0242_49_35 54846 55853 + GT2
TC HRGMv2_0242_49 HRGMv2_0242_49_36 55853 56464 + 9.B.18.1.3
pfam HRGMv2_0242_49 HRGMv2_0242_49_37 56478 57725 + Aminotran_1_2 | DegT_DnrJ_EryC1 | DegT_DnrJ_EryC1
TC HRGMv2_0242_49 HRGMv2_0242_49_38 57759 59669 + 9.B.18.2.1
Gene ID: HRGMv2_0242_49_31
Type: CAZyme
Location: 50177 - 51340 (+)
Gene ID: HRGMv2_0242_49_32
Type: CAZyme
Location: 51557 - 52393 (+)
Gene ID: HRGMv2_0242_49_33
Type: CAZyme
Location: 52420 - 53460 (+)
Gene ID: HRGMv2_0242_49_34
Type: pfam
Location: 53551 - 54816 (+)
Gene ID: HRGMv2_0242_49_35
Type: CAZyme
Location: 54846 - 55853 (+)
Gene ID: HRGMv2_0242_49_36
Type: TC
Location: 55853 - 56464 (+)
Gene ID: HRGMv2_0242_49_37
Type: pfam
Location: 56478 - 57725 (+)
Gene ID: HRGMv2_0242_49_38
Type: TC
Location: 57759 - 59669 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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