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Cluster: HRGMv2_0242_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0242_35 HRGMv2_0242_35_8 9465 10448 - GH179
STP HRGMv2_0242_35 HRGMv2_0242_35_9 10501 11397 - NUDIX
TC HRGMv2_0242_35 HRGMv2_0242_35_10 11406 12788 + 2.A.62.1.3
pfam HRGMv2_0242_35 HRGMv2_0242_35_11 12799 13776 + PFK
TC HRGMv2_0242_35 HRGMv2_0242_35_12 13904 15430 + 3.A.2.1.2
pfam HRGMv2_0242_35 HRGMv2_0242_35_13 15460 15702 + ATP-synt_DE_N
NULL(UNKNOWN) HRGMv2_0242_35 HRGMv2_0242_35_14 15718 16146 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0242_35 HRGMv2_0242_35_15 16153 17211 + 3.A.2.1.7
TC HRGMv2_0242_35 HRGMv2_0242_35_16 17261 17503 + 3.A.2.1.6
pfam HRGMv2_0242_35 HRGMv2_0242_35_17 17554 18072 + ATP-synt_B | YMF19
pfam HRGMv2_0242_35 HRGMv2_0242_35_18 18082 18615 + OSCP
TC HRGMv2_0242_35 HRGMv2_0242_35_19 18660 20219 + 3.A.2.1.4
TC HRGMv2_0242_35 HRGMv2_0242_35_20 20226 21197 + 3.A.2.1.1
TC HRGMv2_0242_35 HRGMv2_0242_35_21 21407 22711 + 2.A.1.10.2
pfam HRGMv2_0242_35 HRGMv2_0242_35_22 22742 23467 + Methyltrans_RNA | PUA_4
pfam HRGMv2_0242_35 HRGMv2_0242_35_23 23522 24895 + DUF4836
TC HRGMv2_0242_35 HRGMv2_0242_35_24 24901 25545 + 3.A.1.125.2
Gene ID: HRGMv2_0242_35_8
Type: CAZyme
Location: 9465 - 10448 (-)
Gene ID: HRGMv2_0242_35_9
Type: STP
Location: 10501 - 11397 (-)
Gene ID: HRGMv2_0242_35_10
Type: TC
Location: 11406 - 12788 (+)
Gene ID: HRGMv2_0242_35_11
Type: pfam
Location: 12799 - 13776 (+)
Gene ID: HRGMv2_0242_35_12
Type: TC
Location: 13904 - 15430 (+)
Gene ID: HRGMv2_0242_35_13
Type: pfam
Location: 15460 - 15702 (+)
Gene ID: HRGMv2_0242_35_14
Type:
Location: 15718 - 16146 (+)
Gene ID: HRGMv2_0242_35_15
Type: TC
Location: 16153 - 17211 (+)
Gene ID: HRGMv2_0242_35_16
Type: TC
Location: 17261 - 17503 (+)
Gene ID: HRGMv2_0242_35_17
Type: pfam
Location: 17554 - 18072 (+)
Gene ID: HRGMv2_0242_35_18
Type: pfam
Location: 18082 - 18615 (+)
Gene ID: HRGMv2_0242_35_19
Type: TC
Location: 18660 - 20219 (+)
Gene ID: HRGMv2_0242_35_20
Type: TC
Location: 20226 - 21197 (+)
Gene ID: HRGMv2_0242_35_21
Type: TC
Location: 21407 - 22711 (+)
Gene ID: HRGMv2_0242_35_22
Type: pfam
Location: 22742 - 23467 (+)
Gene ID: HRGMv2_0242_35_23
Type: pfam
Location: 23522 - 24895 (+)
Gene ID: HRGMv2_0242_35_24
Type: TC
Location: 24901 - 25545 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0242_35_8 vegetarian > vegan 1.20852 0.04549

🧭 Explore Read Mapping of CGC

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