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Cluster: HRGMv2_0242_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0242_5 HRGMv2_0242_5_7 9593 12682 - 1.B.14.6.1
TF HRGMv2_0242_5 HRGMv2_0242_5_8 12937 13944 + LacI
TC HRGMv2_0242_5 HRGMv2_0242_5_9 14012 15322 + 2.A.2.6.2
CAZyme HRGMv2_0242_5 HRGMv2_0242_5_10 15371 18043 + GH77
CAZyme HRGMv2_0242_5 HRGMv2_0242_5_11 18091 20226 + GH97
CAZyme HRGMv2_0242_5 HRGMv2_0242_5_12 20263 22185 + GH13_14
CAZyme HRGMv2_0242_5 HRGMv2_0242_5_13 22209 24134 + GH13_46
Gene ID: HRGMv2_0242_5_7
Type: TC
Location: 9593 - 12682 (-)
Gene ID: HRGMv2_0242_5_8
Type: TF
Location: 12937 - 13944 (+)
Gene ID: HRGMv2_0242_5_9
Type: TC
Location: 14012 - 15322 (+)
Gene ID: HRGMv2_0242_5_10
Type: CAZyme
Location: 15371 - 18043 (+)
Gene ID: HRGMv2_0242_5_11
Type: CAZyme
Location: 18091 - 20226 (+)
Gene ID: HRGMv2_0242_5_12
Type: CAZyme
Location: 20263 - 22185 (+)
Gene ID: HRGMv2_0242_5_13
Type: CAZyme
Location: 22209 - 24134 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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