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Cluster: HRGMv2_0242_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0242_32 HRGMv2_0242_32_24 46117 48555 - GH51_2
CAZyme HRGMv2_0242_32 HRGMv2_0242_32_25 48597 49622 - GH43_5
CAZyme HRGMv2_0242_32 HRGMv2_0242_32_26 49652 52339 - GH43_4
pfam HRGMv2_0242_32 HRGMv2_0242_32_27 52399 54123 - Big_3
pfam HRGMv2_0242_32 HRGMv2_0242_32_28 54157 55911 - SusD_RagB | SusD-like_3
TC HRGMv2_0242_32 HRGMv2_0242_32_29 55948 59154 - 1.B.14.6.1
TF HRGMv2_0242_32 HRGMv2_0242_32_30 59708 62665 - HTH_AraC
pfam HRGMv2_0242_32 HRGMv2_0242_32_31 62838 63929 + Cons_hypoth698
TC HRGMv2_0242_32 HRGMv2_0242_32_32 63961 65793 - 2.A.47.4.8
Gene ID: HRGMv2_0242_32_24
Type: CAZyme
Location: 46117 - 48555 (-)
Gene ID: HRGMv2_0242_32_25
Type: CAZyme
Location: 48597 - 49622 (-)
Gene ID: HRGMv2_0242_32_26
Type: CAZyme
Location: 49652 - 52339 (-)
Gene ID: HRGMv2_0242_32_27
Type: pfam
Location: 52399 - 54123 (-)
Gene ID: HRGMv2_0242_32_28
Type: pfam
Location: 54157 - 55911 (-)
Gene ID: HRGMv2_0242_32_29
Type: TC
Location: 55948 - 59154 (-)
Gene ID: HRGMv2_0242_32_30
Type: TF
Location: 59708 - 62665 (-)
Gene ID: HRGMv2_0242_32_31
Type: pfam
Location: 62838 - 63929 (+)
Gene ID: HRGMv2_0242_32_32
Type: TC
Location: 63961 - 65793 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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