Cluster: HRGMv2_0227_CGC28
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: HRGMv2_0227
- CGC Family ID: CGCFAM_00001
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0227_21 | HRGMv2_0227_21_2 | 2054 | 4030 | - | GH87 |
| NULL(UNKNOWN) | HRGMv2_0227_21 | HRGMv2_0227_21_3 | 4430 | 5347 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0227_21 | HRGMv2_0227_21_4 | 5443 | 8544 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0227_21 | HRGMv2_0227_21_5 | 8581 | 10416 | + | SusD_RagB | SusD-like_3 |
| CAZyme | HRGMv2_0227_21 | HRGMv2_0227_21_6 | 10447 | 12498 | + | GH97 |
| CAZyme | HRGMv2_0227_21 | HRGMv2_0227_21_7 | 12508 | 15255 | + | GH87 |
Gene ID: HRGMv2_0227_21_2
Type: CAZyme
Location: 2054 - 4030 (-)
Type: CAZyme
Location: 2054 - 4030 (-)
Gene ID: HRGMv2_0227_21_3
Type:
Location: 4430 - 5347 (+)
Type:
Location: 4430 - 5347 (+)
Gene ID: HRGMv2_0227_21_4
Type: TC
Location: 5443 - 8544 (+)
Type: TC
Location: 5443 - 8544 (+)
Gene ID: HRGMv2_0227_21_5
Type: pfam
Location: 8581 - 10416 (+)
Type: pfam
Location: 8581 - 10416 (+)
Gene ID: HRGMv2_0227_21_6
Type: CAZyme
Location: 10447 - 12498 (+)
Type: CAZyme
Location: 10447 - 12498 (+)
Gene ID: HRGMv2_0227_21_7
Type: CAZyme
Location: 12508 - 15255 (+)
Type: CAZyme
Location: 12508 - 15255 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-1031
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.