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Cluster: HRGMv2_0227_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0227_9 HRGMv2_0227_9_51 79430 80602 + 9.B.196.1.2
sulfatase HRGMv2_0227_9 HRGMv2_0227_9_52 80620 81654 + S1_22
pfam HRGMv2_0227_9 HRGMv2_0227_9_53 81680 82816 + GHMP_kinases_N | GHMP_kinases_C | GalKase_gal_bdg
CAZyme HRGMv2_0227_9 HRGMv2_0227_9_54 82896 87269 - CE7 | CE7
Gene ID: HRGMv2_0227_9_51
Type: TC
Location: 79430 - 80602 (+)
Gene ID: HRGMv2_0227_9_52
Type: sulfatase
Location: 80620 - 81654 (+)
Gene ID: HRGMv2_0227_9_53
Type: pfam
Location: 81680 - 82816 (+)
Gene ID: HRGMv2_0227_9_54
Type: CAZyme
Location: 82896 - 87269 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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