Cluster: HRGMv2_0227_CGC20
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 6
- Substrate: beta-mannan
- Genome ID: HRGMv2_0227
- CGC Family ID: CGCFAM_00333
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0227_9 | HRGMv2_0227_9_29 | 44198 | 47380 | - | GH5_8 |
| CAZyme | HRGMv2_0227_9 | HRGMv2_0227_9_30 | 47567 | 49129 | - | GH5_8 |
| NULL(UNKNOWN) | HRGMv2_0227_9 | HRGMv2_0227_9_31 | 49345 | 50358 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0227_9 | HRGMv2_0227_9_32 | 50637 | 51866 | - | GlcNAc_2-epim |
| TC | HRGMv2_0227_9 | HRGMv2_0227_9_33 | 51892 | 53298 | - | 2.A.2.3.6 |
| CAZyme | HRGMv2_0227_9 | HRGMv2_0227_9_34 | 53330 | 54496 | - | GH130_1 |
| CAZyme | HRGMv2_0227_9 | HRGMv2_0227_9_35 | 54554 | 55675 | - | GH26 |
| CAZyme | HRGMv2_0227_9 | HRGMv2_0227_9_36 | 55758 | 57146 | - | GH26 |
| pfam | HRGMv2_0227_9 | HRGMv2_0227_9_37 | 57174 | 58496 | - | SGBP_B_XBD |
| pfam | HRGMv2_0227_9 | HRGMv2_0227_9_38 | 58530 | 60224 | - | SusD_RagB | SusD-like_2 | SusD-like_3 |
| TC | HRGMv2_0227_9 | HRGMv2_0227_9_39 | 60252 | 63593 | - | 1.B.14.6.1 |
| CAZyme | HRGMv2_0227_9 | HRGMv2_0227_9_40 | 63932 | 66133 | + | GH36 |
Gene ID: HRGMv2_0227_9_29
Type: CAZyme
Location: 44198 - 47380 (-)
Type: CAZyme
Location: 44198 - 47380 (-)
Gene ID: HRGMv2_0227_9_30
Type: CAZyme
Location: 47567 - 49129 (-)
Type: CAZyme
Location: 47567 - 49129 (-)
Gene ID: HRGMv2_0227_9_31
Type:
Location: 49345 - 50358 (-)
Type:
Location: 49345 - 50358 (-)
Gene ID: HRGMv2_0227_9_32
Type: pfam
Location: 50637 - 51866 (-)
Type: pfam
Location: 50637 - 51866 (-)
Gene ID: HRGMv2_0227_9_33
Type: TC
Location: 51892 - 53298 (-)
Type: TC
Location: 51892 - 53298 (-)
Gene ID: HRGMv2_0227_9_34
Type: CAZyme
Location: 53330 - 54496 (-)
Type: CAZyme
Location: 53330 - 54496 (-)
Gene ID: HRGMv2_0227_9_35
Type: CAZyme
Location: 54554 - 55675 (-)
Type: CAZyme
Location: 54554 - 55675 (-)
Gene ID: HRGMv2_0227_9_36
Type: CAZyme
Location: 55758 - 57146 (-)
Type: CAZyme
Location: 55758 - 57146 (-)
Gene ID: HRGMv2_0227_9_37
Type: pfam
Location: 57174 - 58496 (-)
Type: pfam
Location: 57174 - 58496 (-)
Gene ID: HRGMv2_0227_9_38
Type: pfam
Location: 58530 - 60224 (-)
Type: pfam
Location: 58530 - 60224 (-)
Gene ID: HRGMv2_0227_9_39
Type: TC
Location: 60252 - 63593 (-)
Type: TC
Location: 60252 - 63593 (-)
Gene ID: HRGMv2_0227_9_40
Type: CAZyme
Location: 63932 - 66133 (+)
Type: CAZyme
Location: 63932 - 66133 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-1031
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.