Cluster: HRGMv2_0215_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0215
- CGC Family ID: CGCFAM_00148
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0215_7 | HRGMv2_0215_7_1 | 19 | 2055 | - | GH3 |
| CAZyme | HRGMv2_0215_7 | HRGMv2_0215_7_2 | 2116 | 3342 | - | CE1 |
| CAZyme | HRGMv2_0215_7 | HRGMv2_0215_7_3 | 3360 | 4565 | - | CE1 |
| NULL(UNKNOWN) | HRGMv2_0215_7 | HRGMv2_0215_7_4 | 4599 | 5519 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0215_7 | HRGMv2_0215_7_5 | 5554 | 7116 | - | 8.A.46.1.6 |
| TC | HRGMv2_0215_7 | HRGMv2_0215_7_6 | 7186 | 10251 | - | 1.B.14.6.1 |
Gene ID: HRGMv2_0215_7_1
Type: CAZyme
Location: 19 - 2055 (-)
Type: CAZyme
Location: 19 - 2055 (-)
Gene ID: HRGMv2_0215_7_2
Type: CAZyme
Location: 2116 - 3342 (-)
Type: CAZyme
Location: 2116 - 3342 (-)
Gene ID: HRGMv2_0215_7_3
Type: CAZyme
Location: 3360 - 4565 (-)
Type: CAZyme
Location: 3360 - 4565 (-)
Gene ID: HRGMv2_0215_7_4
Type:
Location: 4599 - 5519 (-)
Type:
Location: 4599 - 5519 (-)
Gene ID: HRGMv2_0215_7_5
Type: TC
Location: 5554 - 7116 (-)
Type: TC
Location: 5554 - 7116 (-)
Gene ID: HRGMv2_0215_7_6
Type: TC
Location: 7186 - 10251 (-)
Type: TC
Location: 7186 - 10251 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.