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Cluster: HRGMv2_0215_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0215_6 HRGMv2_0215_6_15 11940 14027 + 3.A.16.1.1
pfam HRGMv2_0215_6 HRGMv2_0215_6_16 14039 14905 + CTP_transf_1
CAZyme HRGMv2_0215_6 HRGMv2_0215_6_17 14997 16418 - GT19
pfam HRGMv2_0215_6 HRGMv2_0215_6_18 16415 17158 - SurE
TC HRGMv2_0215_6 HRGMv2_0215_6_19 17334 18098 + 8.A.3.2.3
pfam HRGMv2_0215_6 HRGMv2_0215_6_20 18160 19071 + ParBc | HTH_ParB | ParB_dimer
pfam HRGMv2_0215_6 HRGMv2_0215_6_21 19159 19917 + DUF5683
CAZyme HRGMv2_0215_6 HRGMv2_0215_6_22 20005 21363 + GH23
Gene ID: HRGMv2_0215_6_15
Type: TC
Location: 11940 - 14027 (+)
Gene ID: HRGMv2_0215_6_16
Type: pfam
Location: 14039 - 14905 (+)
Gene ID: HRGMv2_0215_6_17
Type: CAZyme
Location: 14997 - 16418 (-)
Gene ID: HRGMv2_0215_6_18
Type: pfam
Location: 16415 - 17158 (-)
Gene ID: HRGMv2_0215_6_19
Type: TC
Location: 17334 - 18098 (+)
Gene ID: HRGMv2_0215_6_20
Type: pfam
Location: 18160 - 19071 (+)
Gene ID: HRGMv2_0215_6_21
Type: pfam
Location: 19159 - 19917 (+)
Gene ID: HRGMv2_0215_6_22
Type: CAZyme
Location: 20005 - 21363 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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