Cluster: HRGMv2_0215_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0215
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0215_5 | HRGMv2_0215_5_8 | 11392 | 11844 | + | 9.B.27.3.3 |
| pfam | HRGMv2_0215_5 | HRGMv2_0215_5_9 | 11884 | 12783 | + | ZnuA |
| TC | HRGMv2_0215_5 | HRGMv2_0215_5_10 | 12797 | 13549 | + | 3.A.1.15.5 |
| pfam | HRGMv2_0215_5 | HRGMv2_0215_5_11 | 13820 | 17254 | + | TMEM260-like |
| CAZyme | HRGMv2_0215_5 | HRGMv2_0215_5_12 | 17392 | 17943 | + | CE4 |
Gene ID: HRGMv2_0215_5_8
Type: TC
Location: 11392 - 11844 (+)
Type: TC
Location: 11392 - 11844 (+)
Gene ID: HRGMv2_0215_5_9
Type: pfam
Location: 11884 - 12783 (+)
Type: pfam
Location: 11884 - 12783 (+)
Gene ID: HRGMv2_0215_5_10
Type: TC
Location: 12797 - 13549 (+)
Type: TC
Location: 12797 - 13549 (+)
Gene ID: HRGMv2_0215_5_11
Type: pfam
Location: 13820 - 17254 (+)
Type: pfam
Location: 13820 - 17254 (+)
Gene ID: HRGMv2_0215_5_12
Type: CAZyme
Location: 17392 - 17943 (+)
Type: CAZyme
Location: 17392 - 17943 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.