Cluster: HRGMv2_0215_CGC49
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0215
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0215_104 | HRGMv2_0215_104_7 | 7175 | 8128 | - | 8.A.21.2.2 |
| pfam | HRGMv2_0215_104 | HRGMv2_0215_104_8 | 8147 | 8596 | - | NfeD |
| peptidase | HRGMv2_0215_104 | HRGMv2_0215_104_9 | 8604 | 9503 | - | M48.UPC |
| CAZyme | HRGMv2_0215_104 | HRGMv2_0215_104_10 | 9953 | 11614 | - | GH109 |
| pfam | HRGMv2_0215_104 | HRGMv2_0215_104_11 | 11839 | 13347 | - | GHL10 |
| TC | HRGMv2_0215_104 | HRGMv2_0215_104_12 | 13389 | 14039 | - | 1.A.62.2.1 |
Gene ID: HRGMv2_0215_104_7
Type: TC
Location: 7175 - 8128 (-)
Type: TC
Location: 7175 - 8128 (-)
Gene ID: HRGMv2_0215_104_8
Type: pfam
Location: 8147 - 8596 (-)
Type: pfam
Location: 8147 - 8596 (-)
Gene ID: HRGMv2_0215_104_9
Type: peptidase
Location: 8604 - 9503 (-)
Type: peptidase
Location: 8604 - 9503 (-)
Gene ID: HRGMv2_0215_104_10
Type: CAZyme
Location: 9953 - 11614 (-)
Type: CAZyme
Location: 9953 - 11614 (-)
Gene ID: HRGMv2_0215_104_11
Type: pfam
Location: 11839 - 13347 (-)
Type: pfam
Location: 11839 - 13347 (-)
Gene ID: HRGMv2_0215_104_12
Type: TC
Location: 13389 - 14039 (-)
Type: TC
Location: 13389 - 14039 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.