Cluster: HRGMv2_0215_CGC47
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0215
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0215_102 | HRGMv2_0215_102_2 | 825 | 2489 | - | GH110 |
| pfam | HRGMv2_0215_102 | HRGMv2_0215_102_3 | 2599 | 3075 | - | DUF5018-rel |
| pfam | HRGMv2_0215_102 | HRGMv2_0215_102_4 | 3106 | 4962 | - | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_0215_102 | HRGMv2_0215_102_5 | 4994 | 8110 | - | 1.B.14.6.1 |
Gene ID: HRGMv2_0215_102_2
Type: CAZyme
Location: 825 - 2489 (-)
Type: CAZyme
Location: 825 - 2489 (-)
Gene ID: HRGMv2_0215_102_3
Type: pfam
Location: 2599 - 3075 (-)
Type: pfam
Location: 2599 - 3075 (-)
Gene ID: HRGMv2_0215_102_4
Type: pfam
Location: 3106 - 4962 (-)
Type: pfam
Location: 3106 - 4962 (-)
Gene ID: HRGMv2_0215_102_5
Type: TC
Location: 4994 - 8110 (-)
Type: TC
Location: 4994 - 8110 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.