Cluster: HRGMv2_0215_CGC45
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0215
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0215_90 | HRGMv2_0215_90_33 | 36825 | 37541 | + | 3.A.1.140.1 |
| pfam | HRGMv2_0215_90 | HRGMv2_0215_90_34 | 37600 | 38919 | + | AA_kinase | ACT_9 |
| pfam | HRGMv2_0215_90 | HRGMv2_0215_90_35 | 39062 | 40219 | + | Orn_DAP_Arg_deC | Orn_Arg_deC_N |
| CAZyme | HRGMv2_0215_90 | HRGMv2_0215_90_36 | 40275 | 41417 | + | GT2 |
Gene ID: HRGMv2_0215_90_33
Type: TC
Location: 36825 - 37541 (+)
Type: TC
Location: 36825 - 37541 (+)
Gene ID: HRGMv2_0215_90_34
Type: pfam
Location: 37600 - 38919 (+)
Type: pfam
Location: 37600 - 38919 (+)
Gene ID: HRGMv2_0215_90_35
Type: pfam
Location: 39062 - 40219 (+)
Type: pfam
Location: 39062 - 40219 (+)
Gene ID: HRGMv2_0215_90_36
Type: CAZyme
Location: 40275 - 41417 (+)
Type: CAZyme
Location: 40275 - 41417 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.