Cluster: HRGMv2_0215_CGC44
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0215
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0215_90 | HRGMv2_0215_90_2 | 1879 | 3513 | - | 1.B.9.4.2 |
| NULL(UNKNOWN) | HRGMv2_0215_90 | HRGMv2_0215_90_3 | 3705 | 4703 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0215_90 | HRGMv2_0215_90_4 | 4895 | 5767 | + | Ubie_methyltran | MTS | PrmA | Methyltransf_11 | Methyltransf_25 | Methyltransf_31 |
| CAZyme | HRGMv2_0215_90 | HRGMv2_0215_90_5 | 5839 | 6750 | - | GH25 |
Gene ID: HRGMv2_0215_90_2
Type: TC
Location: 1879 - 3513 (-)
Type: TC
Location: 1879 - 3513 (-)
Gene ID: HRGMv2_0215_90_3
Type:
Location: 3705 - 4703 (-)
Type:
Location: 3705 - 4703 (-)
Gene ID: HRGMv2_0215_90_4
Type: pfam
Location: 4895 - 5767 (+)
Type: pfam
Location: 4895 - 5767 (+)
Gene ID: HRGMv2_0215_90_5
Type: CAZyme
Location: 5839 - 6750 (-)
Type: CAZyme
Location: 5839 - 6750 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.