Cluster: HRGMv2_0215_CGC41
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0215
- CGC Family ID: CGCFAM_02563
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0215_84 | HRGMv2_0215_84_50 | 61783 | 63237 | - | CE20 |
| pfam | HRGMv2_0215_84 | HRGMv2_0215_84_51 | 63358 | 64536 | - | AhpC-TSA | Thioredoxin_8 | DUF4369 |
| pfam | HRGMv2_0215_84 | HRGMv2_0215_84_52 | 64731 | 67049 | + | KH_1 | S1 | RNase_PH | RNase_PH | RNase_PH_C | RNase_PH_C | PNPase |
| TC | HRGMv2_0215_84 | HRGMv2_0215_84_53 | 67754 | 69418 | + | 9.B.174.1.2 |
Gene ID: HRGMv2_0215_84_50
Type: CAZyme
Location: 61783 - 63237 (-)
Type: CAZyme
Location: 61783 - 63237 (-)
Gene ID: HRGMv2_0215_84_51
Type: pfam
Location: 63358 - 64536 (-)
Type: pfam
Location: 63358 - 64536 (-)
Gene ID: HRGMv2_0215_84_52
Type: pfam
Location: 64731 - 67049 (+)
Type: pfam
Location: 64731 - 67049 (+)
Gene ID: HRGMv2_0215_84_53
Type: TC
Location: 67754 - 69418 (+)
Type: TC
Location: 67754 - 69418 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.