Cluster: HRGMv2_0215_CGC39
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0215
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0215_79 | HRGMv2_0215_79_22 | 35626 | 36300 | + | 3.A.1.122.2 |
| pfam | HRGMv2_0215_79 | HRGMv2_0215_79_23 | 36362 | 37261 | - | IPPT | IPT |
| pfam | HRGMv2_0215_79 | HRGMv2_0215_79_24 | 37261 | 38031 | - | Hexapep | Acetyltransf_11 |
| CAZyme | HRGMv2_0215_79 | HRGMv2_0215_79_25 | 38047 | 39429 | - | CE11 |
Gene ID: HRGMv2_0215_79_22
Type: TC
Location: 35626 - 36300 (+)
Type: TC
Location: 35626 - 36300 (+)
Gene ID: HRGMv2_0215_79_23
Type: pfam
Location: 36362 - 37261 (-)
Type: pfam
Location: 36362 - 37261 (-)
Gene ID: HRGMv2_0215_79_24
Type: pfam
Location: 37261 - 38031 (-)
Type: pfam
Location: 37261 - 38031 (-)
Gene ID: HRGMv2_0215_79_25
Type: CAZyme
Location: 38047 - 39429 (-)
Type: CAZyme
Location: 38047 - 39429 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.