Cluster: HRGMv2_0215_CGC34
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0215
- CGC Family ID: CGCFAM_02414
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0215_67 | HRGMv2_0215_67_8 | 8756 | 11422 | + | 3.A.3.4.1 |
| pfam | HRGMv2_0215_67 | HRGMv2_0215_67_9 | 11696 | 12736 | + | OprB |
| pfam | HRGMv2_0215_67 | HRGMv2_0215_67_10 | 12795 | 13769 | - | Mfa2 |
| CAZyme | HRGMv2_0215_67 | HRGMv2_0215_67_11 | 13984 | 16020 | - | GH20 |
Gene ID: HRGMv2_0215_67_8
Type: TC
Location: 8756 - 11422 (+)
Type: TC
Location: 8756 - 11422 (+)
Gene ID: HRGMv2_0215_67_9
Type: pfam
Location: 11696 - 12736 (+)
Type: pfam
Location: 11696 - 12736 (+)
Gene ID: HRGMv2_0215_67_10
Type: pfam
Location: 12795 - 13769 (-)
Type: pfam
Location: 12795 - 13769 (-)
Gene ID: HRGMv2_0215_67_11
Type: CAZyme
Location: 13984 - 16020 (-)
Type: CAZyme
Location: 13984 - 16020 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.