Cluster: HRGMv2_0215_CGC32
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0215
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0215_65 | HRGMv2_0215_65_134 | 168456 | 170636 | + | GH36 |
| pfam | HRGMv2_0215_65 | HRGMv2_0215_65_135 | 170731 | 171513 | - | AA_kinase |
| TC | HRGMv2_0215_65 | HRGMv2_0215_65_136 | 171577 | 173238 | - | 4.C.1.1.6 |
Gene ID: HRGMv2_0215_65_134
Type: CAZyme
Location: 168456 - 170636 (+)
Type: CAZyme
Location: 168456 - 170636 (+)
Gene ID: HRGMv2_0215_65_135
Type: pfam
Location: 170731 - 171513 (-)
Type: pfam
Location: 170731 - 171513 (-)
Gene ID: HRGMv2_0215_65_136
Type: TC
Location: 171577 - 173238 (-)
Type: TC
Location: 171577 - 173238 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0215_65_135 | vegetarian > vegan | 1.07571 | 0.01557 |