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Cluster: HRGMv2_0215_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0215_65 HRGMv2_0215_65_81 97256 98620 + 2.A.22.5.3
TC HRGMv2_0215_65 HRGMv2_0215_65_82 98674 100029 + 2.A.22.5.3
pfam HRGMv2_0215_65 HRGMv2_0215_65_83 100126 101085 - HHH_3 | HHH_3 | HHH_3
CAZyme HRGMv2_0215_65 HRGMv2_0215_65_84 101666 102742 + GH53
CAZyme HRGMv2_0215_65 HRGMv2_0215_65_85 102830 105289 + GH2
TF HRGMv2_0215_65 HRGMv2_0215_65_86 105676 108525 + HTH_AraC
TC HRGMv2_0215_65 HRGMv2_0215_65_87 108806 111742 + 1.B.14.6.1
TC HRGMv2_0215_65 HRGMv2_0215_65_88 111763 113289 + 8.A.46.1.5
Gene ID: HRGMv2_0215_65_81
Type: TC
Location: 97256 - 98620 (+)
Gene ID: HRGMv2_0215_65_82
Type: TC
Location: 98674 - 100029 (+)
Gene ID: HRGMv2_0215_65_83
Type: pfam
Location: 100126 - 101085 (-)
Gene ID: HRGMv2_0215_65_84
Type: CAZyme
Location: 101666 - 102742 (+)
Gene ID: HRGMv2_0215_65_85
Type: CAZyme
Location: 102830 - 105289 (+)
Gene ID: HRGMv2_0215_65_86
Type: TF
Location: 105676 - 108525 (+)
Gene ID: HRGMv2_0215_65_87
Type: TC
Location: 108806 - 111742 (+)
Gene ID: HRGMv2_0215_65_88
Type: TC
Location: 111763 - 113289 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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