Cluster: HRGMv2_0215_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0215
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0215_65 | HRGMv2_0215_65_57 | 69347 | 70453 | - | GT28 |
| TC | HRGMv2_0215_65 | HRGMv2_0215_65_58 | 70557 | 71834 | - | 2.A.103.1.2 |
| pfam | HRGMv2_0215_65 | HRGMv2_0215_65_59 | 71892 | 73229 | - | Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N |
| TC | HRGMv2_0215_65 | HRGMv2_0215_65_60 | 73271 | 74539 | - | 9.B.146.1.3 |
Gene ID: HRGMv2_0215_65_57
Type: CAZyme
Location: 69347 - 70453 (-)
Type: CAZyme
Location: 69347 - 70453 (-)
Gene ID: HRGMv2_0215_65_58
Type: TC
Location: 70557 - 71834 (-)
Type: TC
Location: 70557 - 71834 (-)
Gene ID: HRGMv2_0215_65_59
Type: pfam
Location: 71892 - 73229 (-)
Type: pfam
Location: 71892 - 73229 (-)
Gene ID: HRGMv2_0215_65_60
Type: TC
Location: 73271 - 74539 (-)
Type: TC
Location: 73271 - 74539 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.