Cluster: HRGMv2_0215_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0215
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0215_2 | HRGMv2_0215_2_44 | 72950 | 76063 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0215_2 | HRGMv2_0215_2_45 | 76095 | 77831 | + | SusD_RagB | SusD-like_3 |
| CAZyme | HRGMv2_0215_2 | HRGMv2_0215_2_46 | 77862 | 79580 | + | GH32 |
| TC | HRGMv2_0215_2 | HRGMv2_0215_2_47 | 79744 | 80895 | + | 2.A.1.7.17 |
Gene ID: HRGMv2_0215_2_44
Type: TC
Location: 72950 - 76063 (+)
Type: TC
Location: 72950 - 76063 (+)
Gene ID: HRGMv2_0215_2_45
Type: pfam
Location: 76095 - 77831 (+)
Type: pfam
Location: 76095 - 77831 (+)
Gene ID: HRGMv2_0215_2_46
Type: CAZyme
Location: 77862 - 79580 (+)
Type: CAZyme
Location: 77862 - 79580 (+)
Gene ID: HRGMv2_0215_2_47
Type: TC
Location: 79744 - 80895 (+)
Type: TC
Location: 79744 - 80895 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.